Publications made with imaging support from NMI.
2024
Blaschek L, Serk H, Pesquet E. “Functional Complexity on a Cellular Scale: Why In Situ Analyses Are Indispensable for Our Understanding of Lignified Tissues.”, J. Agric. Food Chem. 2024, Jun ; 72(24):13552–13560.
Pesquet E., Blaschek L., Takahashi J., Yamamoto M., Champagne A., Nuoendagula, Subbotina E., Dimotakis C., Bacsik Z. and Kajita S. “Bulk and in situ quantification of coniferaldehyde monomers in lignin.”, Methods Mol. Biol. 2024; 2722: 201-226.
Nordahl L, Akkuratov EE, Heimgärtner J, …, Wennmalm S, Brismar H, “Detection and quantification of Na,K-ATPase dimers in the plasma membrane of living cells by FRET-FCS.”, Biochimica et Biophysica Acta (BBA) – General Subjects, 2024, 1868 (7), 130619, https://doi.org/10.1016/j.bbagen.2024.130619
Otomo K, Omura T, Nozawa Y, …, Brismar H, Susaki EA, “descSPIM: an affordable and easy-to-build light-sheet microscope optimized for tissue clearing techniques.”, Nat Commun, 2024, 15 (1), 4941, https://doi.org/10.1038/s41467-024-49131-1
Wernersson E, Gelali E, Girelli G, …, Crosetto N, Bienko M, “Deconwolf enables high-performance deconvolution of widefield fluorescence microscopy images.”, Nat. Methods, 2024, https://doi.org/10.1038/s41592-024-02294-7
Senftleben ML, Bajor A, Hirata E, Abrahamsson S, Brismar H, “Fast volumetric multifocus structured illumination microscopy of subcellular dynamics in living cells”, Biomed. Opt. Express, 2024, 15 (4), 2281, https://doi.org/10.1364/boe.516261
ElBeck Z, Hossain MB, Siga H, …, Végvári Á, Betsholtz C, “Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner”, Nat Commun, 2024, 15 (1), https://doi.org/10.1038/s41467-024-46384-8
Ragaller et al, “Quantifying Fluorescence Lifetime Responsiveness of Environment-Sensitive Probes for Membrane Fluidity Measurements”, J. Phys. Chem. B, 2024, https://doi.org/https://doi.org/10.1021/acs.jpcb.3c07006
Sariyar S, Sountoulidis A, Hansen JN, …, Lundberg E, Ayoglu B, “High-parametric protein maps reveal the spatial organization in early-developing human lung”,, 2024, https://doi.org/10.1101/2024.01.25.577163
Andronico LA, Jiang Y, Carannante V, …, Brodin P, Sezgin E, “High-throughput analysis of membrane fluidity unveils a hidden dimension in immune cell states”,, 2024, https://doi.org/10.1101/2024.01.15.575649
Drexhage LZ, Zhang S, Dupont M, …, Karaji N, Sattentau QJ, “Apoptosis-mediated ADAM10 activation removes a mucin barrier promoting T cell efferocytosis.”, Nat Commun, 2024, 15 (1), 541, https://doi.org/10.1038/s41467-023-44619-8
Mushtaq F, Nadeem A, Yabrag A, …, Uhlin BE, Ahmad I, “Colony phase variation switch modulates antimicrobial tolerance and biofilm formation in Acinetobacter baumannii.”, Microbiol Spectr, 2024, e0295623, https://doi.org/10.1128/spectrum.02956-23
2023
Silao FGS, Jiang T, Bereczky-Veress B, Kühbacher A, Ryman K, Uwamohoro N, Jenull S, Nogueira F, Ward M, Lion T, Urban CF, Rupp S, Kuchler K, Chen C, Peuckert C, Ljungdahl PO. “Proline catabolism is a key factor facilitating Candida albicans pathogenicity.”, PLoS Pathog. 2023 Nov 2;19(11):e1011677. doi: 10.1371/journal.ppat.1011677
Sasaki T, Saito K, Inoue D, Serk H, Sugiyama Y, Pesquet E, Shimamoto Y, Oda Y. “Confined-microtubule assembly shapes three-dimensional cell wall structures in xylem vessels.”, Nat Commun. 2023 Nov 13; 14(1):6987.
Casas PG, Rossini M, Påvénius L, …, Pizzo P, Filadi R, “Simultaneous detection of membrane contact dynamics and associated Ca2+signals by reversible chemogenetic reporters”,, 2023, https://doi.org/10.1101/2023.12.28.573515
Kolonelou C, Bräutigam L, Edwards S, …, Andersson O, Teixeira AI, “Biodistribution of DNA-origami nanostructures in live zebrafish embryos with single-cell resolution”,, 2023, https://doi.org/10.1101/2023.12.22.572973
Brismar H, Senftleben M, Bajor A, Hirata E, Abrahamsson S, “Fast volumetric multifocus structured illumination microscopy of subcellular dynamics in living cells”,, 2023, https://doi.org/10.1364/opticaopen.24849864.v1
Pennacchietti F, Alvelid J, Morales RA, …, Verkhusha VV, Testa I, “Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms.”, Nat Commun, 2023, 14 (1), 8402, https://doi.org/10.1038/s41467-023-44054-9
Ahmad I, Nadeem A, Mushtaq F, …, Wai SN, Uhlin BE, “Csu pili dependent biofilm formation and virulence of Acinetobacter baumannii.”, NPJ Biofilms Microbiomes, 2023, 9 (1), 101, https://doi.org/10.1038/s41522-023-00465-6
Olofsson Bagge R, Berndtsson J, Urzì O, …, Micaroni M, Crescitelli R, “Three-dimensional reconstruction of interstitial extracellular vesicles in human liver as determined by electron tomography.”, J Extracell Vesicles, 2023, 12 (12), e12380, https://doi.org/10.1002/jev2.12380
Hu M, Zhang Y, Zhang X, …, Shao LR, Billig H, “Defective Uterine Spiral Artery Remodeling and Placental Senescence in a Pregnant Rat Model of Polycystic Ovary Syndrome.”, Am. J. Pathol., 2023, 193 (12), 1916-1935, https://doi.org/10.1016/j.ajpath.2023.08.008
Unnersjö-Jess D, Ramdedovic A, Butt L, …, Schermer B, Benzing T, “Advanced optical imaging reveals preferred spatial orientation of podocyte processes along the axis of glomerular capillaries.”, Kidney Int., 2023, 104 (6), 1164-1169, https://doi.org/10.1016/j.kint.2023.08.024
Karlsson J, Sah VR, Olofsson R, …, Nilsson LM, Nilsson JA, “Patient-derived xenografts and single-cell sequencing identifies three subtypes of tumor-reactive lymphocytes in uveal melanoma metastases”, eLife, 2023
Chen X, Pandit S, Shi L, …, Petranovic D, Mijakovic I, “Graphene Oxide Attenuates Toxicity of Amyloid‐β Aggregates in Yeast by Promoting Disassembly and Boosting Cellular Stress Response”, Adv Funct Materials, 2023, 33 (45), https://doi.org/10.1002/adfm.202304053
Zlatkovic J, Dalmau Gasull A, Hägg D, …, Anesten F, Jansson JO, “Reduction of body weight by increased loading is associated with activation of norepinephrine neurones in the medial nucleus of the solitary tract.”, J Neuroendocrinol, 2023, e13352, https://doi.org/10.1111/jne.13352
Ragaller F, Sjule E, Urem YB, …, Blom H, Sezgin E, “Quantifying fluorescence lifetime responsiveness of environment sensitive probes for membrane fluidity measurements”,, 2023, https://doi.org/10.1101/2023.10.23.563572
Tang C, Gandla ML, Jönsson LJ, “LPMO-supported saccharification of biomass: effects of continuous aeration of reaction mixtures with variable fractions of water-insoluble solids and cellulolytic enzymes.”, Biotechnol Biofuels Bioprod, 2023, 16 (1), 156, https://doi.org/10.1186/s13068-023-02407-y
Barbotin A, Billaudeau C, Sezgin E, Carballido-López R, “Quantification of membrane fluidity in bacteria using TIR-FCS”,, 2023, https://doi.org/10.1101/2023.10.13.562271
Windhager J, Zanotelli VRT, Schulz D, …, Bodenmiller B, Eling N, “An end-to-end workflow for multiplexed image processing and analysis.”, Nat Protoc, 2023, https://doi.org/10.1038/s41596-023-00881-0
Palmgren H, Petkevicius K, Bartesaghi S, …, Peng XR, Pilon M, “Elevated Adipocyte Membrane Phospholipid Saturation Does Not Compromise Insulin Signaling.”, Diabetes, 2023, 72 (10), 1350-1363, https://doi.org/10.2337/db22-0293
Zäll E, Karlsson S, Järn M, …, Lundberg P, Wågberg T, “Durability of antireflective SiO2 coatings with closed pore structure”, Solar Energy Materials and Solar Cells, 2023, 261, 112521, https://doi.org/10.1016/j.solmat.2023.112521
Ichioka Y, Virto L, Nuevo P, …, Sanz M, Berglundh T, “Decontamination of biofilm-contaminated implant surfaces: An in vitro evaluation.”, Clin Oral Implants Res, 2023, 34 (10), 1058-1072, https://doi.org/10.1111/clr.14136
Roselli S, Satir TM, Camacho R, …, Zetterberg H, Agholme L, “APP-BACE1 Interaction and Intracellular Localization Regulate Aβ Production in iPSC-Derived Cortical Neurons.”, Cell Mol Neurobiol, 2023, 43 (7), 3653-3668, https://doi.org/10.1007/s10571-023-01374-0
Olander J, Barkarmo S, Hammarström Johansson P, Wennerberg A, Stenport VF, “Inflammatory Gene Profile and Particle Presence in Peri-Implant Mucosa: a Pilot Study on 9 Patients.”, J Oral Maxillofac Res, 2023, 14 (3), e2, https://doi.org/10.5037/jomr.2023.14302
Luong NT, Veyret N, Boily JF, “CO2 Mineralization by MgO Nanocubes in Nanometric Water Films.”, ACS Appl Mater Interfaces, 2023, 15 (38), 45055-45063, https://doi.org/10.1021/acsami.3c10590
Hellman S, Martin F, Tydén E, …, Svedberg P, Fossum C, “Equine enteroid-derived monolayers recapitulate key features of parasitic intestinal nematode infection”,, 2023, https://doi.org/10.21203/rs.3.rs-3342735/v1
Ornithopoulou E, Åstrand C, Gustafsson L, Crouzier T, Hedhammar M, “Self-Assembly of RGD-Functionalized Recombinant Spider Silk Protein into Microspheres in Physiological Buffer and in the Presence of Hyaluronic Acid.”, ACS Appl Bio Mater, 2023, 6 (9), 3696-3705, https://doi.org/10.1021/acsabm.3c00373
Schmied C, Nelson MS, Avilov S, …, Tischer C, Jambor HK, “Community-developed checklists for publishing images and image analyses.”, Nat. Methods, 2023, https://doi.org/10.1038/s41592-023-01987-9
Sommerauer C, Gallardo-Dodd CJ, Savva C, …, Williams C, Kutter C, “Estrogen receptor activation remodelsTEAD1gene expression to alleviate nonalcoholic fatty liver disease”,, 2023, https://doi.org/10.1101/2023.09.07.556687
Ramasamy KP, Brugel S, Eriksson KIA, Andersson A, “Pseudomonas ability to utilize different carbon substrates and adaptation influenced by protozoan grazing.”, Environ. Res., 2023, 232, 116419, https://doi.org/10.1016/j.envres.2023.116419
Babazadeh R, Schneider KL, Fischbach A, …, Liu B, Nystrom T, “The yeast guanine nucleotide exchange factor Sec7 is a bottleneck in spatial protein quality control and detoxifies neurological disease proteins.”, Sci Rep, 2023, 13 (1), 14068, https://doi.org/10.1038/s41598-023-41188-0
Luong NT, Boily JF, “Water Film-Driven Brucite Nanosheet Growth and Stacking.”, Langmuir, 2023, 39 (31), 11090-11098, https://doi.org/10.1021/acs.langmuir.3c01411
Boussardon C, Carrie C, Keech O, “Comparison of plastid proteomes points towards a higher plastidial redox turnover in vascular tissues than in mesophyll cells.”, J. Exp. Bot., 2023, 74 (14), 4110-4124, https://doi.org/10.1093/jxb/erad133
Nilsson JR, Benitez-Martin C, Sansom HG, …, Magennis SW, Wilhelmsson LM, “Multiphoton characterization and live cell imaging using fluorescent adenine analogue 2CNqA.”, Phys Chem Chem Phys, 2023, 25 (30), 20218-20224, https://doi.org/10.1039/d3cp01147j
Nilsson G, Mottahedin A, Zelco A, …, Leavenworth JW, Wang X, “Two different isoforms of osteopontin modulate myelination and axonal integrity.”, FASEB Bioadv, 2023, 5 (8), 336-353, https://doi.org/10.1096/fba.2023-00030
Ichioka Y, Derks J, Larsson L, Berglundh T, “Surface decontamination of explanted peri-implantitis-affected implants.”, J Clin Periodontol, 2023, 50 (8), 1113-1122, https://doi.org/10.1111/jcpe.13836
Bogaert A, Fijalkowska D, Staes A, …, Calderwood MA, Gevaert K, “N-terminal proteoforms may engage in different protein complexes.”, Life Sci. Alliance, 2023, 6 (8), https://doi.org/10.26508/lsa.202301972
Adeniyi KO, Osmanaj B, Manavalan G, …, Boily JF, Tesfalidet S, “Engineering of layered iron vanadate nanostructure for electrocatalysis: Simultaneous detection of methotrexate and folinic acid in blood serum”, Electrochimica Acta, 2023, 458, 142538, https://doi.org/10.1016/j.electacta.2023.142538
Doktorova M, Symons JL, Zhang X, …, Levental KR, Levental I, “Cell Membranes Sustain Phospholipid Imbalance Via Cholesterol Asymmetry”,, 2023, https://doi.org/10.1101/2023.07.30.551157
Nguyen TDK, Rabasco S, Lork AA, Toit AD, Ewing AG, “Quantitative Nanoscale Secondary Ion Mass Spectrometry (NanoSIMS) Imaging of Individual Vesicles to Investigate the Relation between Fraction of Chemical Release and Vesicle Size.”, Angew. Chem. Int. Ed. Engl., 2023, 62 (28), e202304098, https://doi.org/10.1002/anie.202304098
Laudette M, Lindbom M, Arif M, …, Levin MC, Borén J, “Cardiomyocyte-specific PCSK9 deficiency compromises mitochondrial bioenergetics and heart function.”, Cardiovasc. Res., 2023, 119 (7), 1537-1552, https://doi.org/10.1093/cvr/cvad041
Vaz R, Edwards S, Dueñas-Rey A, Hofmeister W, Lindstrand A, “Loss of ctnnd2b affects neuronal differentiation and behavior in zebrafish.”, Front. Neurosci., 2023, 17, 1205653, https://doi.org/10.3389/fnins.2023.1205653
Liu Y, Tang S, Gao Z, …, Edman L, Wang J, “The influence of the capping ligands on the optoelectronic performance, morphology, and ion liberation of CsPbBr3 perovskite quantum dots”, Nano Res., 2023, 16 (7), 10626-10633, https://doi.org/10.1007/s12274-023-5589-y
Barreby E, Strunz B, Nock S, …, Chen P, Aouadi M, “Human resident liver myeloid cells protect against metabolic stress in obesity.”, Nat Metab, 2023, 5 (7), 1188-1203, https://doi.org/10.1038/s42255-023-00834-7
Wagri NK, Carlborg M, Eriksson M, …, Broström M, Andersson BM, “High temperature interactions between K-rich biomass ash and MgO-based refractories”, Journal of the European Ceramic Society, 2023, 43 (8), 3770-3777, https://doi.org/10.1016/j.jeurceramsoc.2023.01.058
Luong NT, Holmboe M, Boily JF, “MgO nanocube hydroxylation by nanometric water films.”, Nanoscale, 2023, 15 (24), 10286-10294, https://doi.org/10.1039/d2nr07140a
Ramachandran M, Vaccaro A, van de Walle T, …, Essand M, Dimberg A, “Tailoring vascular phenotype through AAV therapy promotes anti-tumor immunity in glioma.”, Cancer Cell, 2023, 41 (6), 1134-1151.e10, https://doi.org/10.1016/j.ccell.2023.04.010
Sych T, Schlegel J, Barriga HMG, …, Stevens MM, Sezgin E, “High-throughput measurement of the content and properties of nano-sized bioparticles with single-particle profiler.”, Nat. Biotechnol., 2023, https://doi.org/10.1038/s41587-023-01825-5
Miranda DA, Marín K, Sundman O, …, Carrasco C, Martín C, “Production and Characterization of Poly(3-hydroxybutyrate) from Halomonas boliviensis LC1 Cultivated in Hydrolysates of Quinoa Stalks”, Fermentation, 2023, 9 (6), 556, https://doi.org/10.3390/fermentation9060556
Øvrebø Ø, Ojansivu M, Kartasalo K, …, Holme MN, Stevens MM, “RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy.”, BMC Bioinformatics, 2023, 24 (1), 237, https://doi.org/10.1186/s12859-023-05320-1
Wagri NK, Carlborg M, Eriksson M, …, Broström M, Andersson BM, “High temperature interactions between coal ash and MgO-based refractories in lime kiln conditions”, Fuel, 2023, 342, 127711, https://doi.org/10.1016/j.fuel.2023.127711
Koutarapu S, Ge J, Jha D, …, Michno W, Hanrieder J, “Correlative Chemical Imaging Identifies Amyloid Peptide Signatures of Neuritic Plaques and Dystrophy in Human Sporadic Alzheimer’s Disease.”, Brain Connect, 2023, 13 (5), 297-306, https://doi.org/10.1089/brain.2022.0047
Ruiz M, Devkota R, Kaper D, …, Borén J, Pilon M, “AdipoR2 recruits protein interactors to promote fatty acid elongation and membrane fluidity.”, J. Biol. Chem., 2023, 299 (6), 104799, https://doi.org/10.1016/j.jbc.2023.104799
Sunadome K, Erickson AG, Kah D, …, Fried K, Adameyko I, “Directionality of developing skeletal muscles is set by mechanical forces.”, Nat Commun, 2023, 14 (1), 3060, https://doi.org/10.1038/s41467-023-38647-7
Raj D, Kraish B, Martikainen J, …, Kao G, Naredi P, “Cisplatin toxicity is counteracted by the activation of the p38/ATF-7 signaling pathway in post-mitotic C. elegans.”, Nat Commun, 2023, 14 (1), 2886, https://doi.org/10.1038/s41467-023-38568-5
Park KS, Svennerholm K, Crescitelli R, …, Farewell A, Lötvall J, “Detoxified synthetic bacterial membrane vesicles as a vaccine platform against bacteria and SARS-CoV-2.”, J Nanobiotechnology, 2023, 21 (1), 156, https://doi.org/10.1186/s12951-023-01928-w
Stokowska A, Aswendt M, Zucha D, …, Pekny M, Pekna M, “Complement C3a treatment accelerates recovery after stroke via modulation of astrocyte reactivity and cortical connectivity.”, J. Clin. Invest., 2023, 133 (10), https://doi.org/10.1172/JCI162253
Schlegel J, Porebski B, Andronico L, …, Fernandez-Capetillo O, Sezgin E, “A Multiparametric and High-Throughput Platform for Host–Virus Binding Screens”, Nano Lett., 2023, 23 (9), 3701-3707, https://doi.org/10.1021/acs.nanolett.2c04884
Wenger A, Karlsson I, Kling T, Carén H, “CRISPR-Cas9 knockout screen identifies novel treatment targets in childhood high-grade glioma.”, Clin Epigenetics, 2023, 15 (1), 80, https://doi.org/10.1186/s13148-023-01498-6
Franzén Boger M, Benhach N, Hasselrot T, …, Broliden K, Tjernlund A, “A topical rectal douche product containing Q-Griffithsin does not disrupt the epithelial border or alter CD4+ cell distribution in the human rectal mucosa.”, Sci Rep, 2023, 13 (1), 7547, https://doi.org/10.1038/s41598-023-34107-w
Otomo K, Omura T, Nozawa Y, Saito Y, Susaki EA, “descSPIM: Affordable and Easy-to-Build Light-Sheet Microscopy for Tissue Clearing Technique Users”,, 2023, https://doi.org/10.1101/2023.05.02.539136
Pielawski N, Andersson A, Avenel C, …, Solorzano L, Wählby C, “TissUUmaps 3: Improvements in interactive visualization, exploration, and quality assessment of large-scale spatial omics data.”, Heliyon, 2023, 9 (5), e15306, https://doi.org/10.1016/j.heliyon.2023.e15306
Li X, Andrusivova Z, Czarnewski P, …, Lundeberg J, Sundström E, “Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin.”, Nat. Neurosci., 2023, 26 (5), 891-901, https://doi.org/10.1038/s41593-023-01312-9
Shionoya K, Nilsson A, Engström Ruud L, Engblom D, Blomqvist A, “Melanocortin-4 receptors on neurons in the parabrachial nucleus mediate inflammation-induced suppression of food-seeking behavior.”, Brain, Behavior, and Immunity, 2023, 110, 80-84, https://doi.org/10.1016/j.bbi.2023.02.014
Skoglund N, Thyrel M, Perrin J, Strandberg A, “Characterisation of ash particles from co-combustion of bark and sludges from pulp and paper industry”, Fuel, 2023, 340, 127597, https://doi.org/10.1016/j.fuel.2023.127597
Dreos A, Ge J, Najera F, …, Zetterberg H, Hanrieder J, “Investigating New Applications of a Photoswitchable Fluorescent Norbornadiene as a Multifunctional Probe for Delineation of Amyloid Plaque Polymorphism.”, ACS Sens., 2023, 8 (4), 1500-1509, https://doi.org/10.1021/acssensors.2c02496
Pucci M, Moschetti M, Urzì O, …, Alessandro R, Fontana S, “Colorectal cancer-derived small extracellular vesicles induce TGFβ1-mediated epithelial to mesenchymal transition of hepatocytes.”, Cancer Cell Int, 2023, 23 (1), 77, https://doi.org/10.1186/s12935-023-02916-8
Schmied L, Luu TT, Søndergaard JN, …, Saeed MB, Höglund P, “SHP-1 localization to the activating immune synapse promotes NK cell tolerance in MHC class I deficiency.”, Sci Signal, 2023, 16 (780), eabq0752, https://doi.org/10.1126/scisignal.abq0752
Chotiwan N, Rosendal E, Willekens SMA, …, Marcellino D, Överby AK, “Type I interferon shapes brain distribution and tropism of tick-borne flavivirus.”, Nat Commun, 2023, 14 (1), 2007, https://doi.org/10.1038/s41467-023-37698-0
Chotiwan N, Rosendal E, Willekens SMA, …, Marcellino D, Överby AK, “Type I interferon shapes brain distribution and tropism of tick-borne flavivirus”, Nat Commun, 2023, 14 (1), https://doi.org/10.1038/s41467-023-37698-0
Larsson E, Morén B, McMahon KA, Parton RG, Lundmark R, “Dynamin2 functions as an accessory protein to reduce the rate of caveola internalization.”, J. Cell Biol., 2023, 222 (4), https://doi.org/10.1083/jcb.202205122
Unnersjö-Jess D, Butt L, Höhne M, …, Bozek K, Benzing T, “Deep learning-based segmentation and quantification of podocyte foot process morphology suggests differential patterns of foot process effacement across kidney pathologies.”, Kidney Int., 2023, https://doi.org/10.1016/j.kint.2023.03.013
Wehrli PM, Ge J, Michno W, …, Blennow K, Hanrieder J, “Correlative Chemical Imaging and Spatial Chemometrics Delineate Alzheimer Plaque Heterogeneity at High Spatial Resolution.”, JACS Au, 2023, 3 (3), 762-774, https://doi.org/10.1021/jacsau.2c00492
Erickson A, Motta A, Kastriti ME, …, Bonanomi D, Adameyko I, “Motor nerves direct the development of the sympathetic nervous system”,, 2023, https://doi.org/10.1101/2023.03.17.533145
Podraza-Farhanieh A, Raj D, Kao G, Naredi P, “A proinsulin-dependent interaction between ENPL-1 and ASNA-1 in neurons is required to maintain insulin secretion in C. elegans.”, Development, 2023, 150 (6), https://doi.org/10.1242/dev.201035
Ge J, Koutarapu S, Jha D, …, Blennow K, Hanrieder J, “Tetramodal Chemical Imaging Delineates the Lipid-Amyloid Peptide Interplay at Single Plaques in Transgenic Alzheimer’s Disease Models.”, Anal. Chem., 2023, 95 (10), 4692-4702, https://doi.org/10.1021/acs.analchem.2c05302
Ruiz M, Panagaki D, Höög JL, Pilon M, “Striking membrane defects in AdipoR-deficient cells.”, J. Lipid Res., 2023, 64 (3), 100335, https://doi.org/10.1016/j.jlr.2023.100335
Stenqvist B, Ericson MB, Gregoire S, …, Engblom J, Sparr E, “Membrane permeability based on mesh analysis”, Journal of Colloid and Interface Science, 2023, 633, 526-535, https://doi.org/10.1016/j.jcis.2022.11.013
Häggström G, Karl Hannl T, Holmgren P, …, Skoglund N, Öhman M, “Fate of phosphorus in pulverized fuel co-combustion of sewage sludge and agricultural residues”, Fuel, 2023, 335, 127059, https://doi.org/10.1016/j.fuel.2022.127059
Birchenough GMH, Schroeder BO, Sharba S, …, Bäckhed F, Hansson GC, “Muc2-dependent microbial colonization of the jejunal mucus layer is diet sensitive and confers local resistance to enteric pathogen infection.”, Cell Rep, 2023, 42 (2), 112084, https://doi.org/10.1016/j.celrep.2023.112084
Hardege I, Morud J, Courtney A, Schafer WR, “A Novel and Functionally Diverse Class of Acetylcholine-Gated Ion Channels.”, J. Neurosci., 2023, 43 (7), 1111-1124, https://doi.org/10.1523/JNEUROSCI.1516-22.2022
Boussardon C, Keech O, “Tissue-Specific Isolation of Tagged Arabidopsis Plastids.”, Curr Protoc, 2023, 3 (2), e673, https://doi.org/10.1002/cpz1.673
Pierozan P, Kosnik M, Karlsson O, “High-content analysis shows synergistic effects of low perfluorooctanoic acid (PFOS) and perfluorooctane sulfonic acid (PFOA) mixture concentrations on human breast epithelial cell carcinogenesis.”, Environ Int, 2023, 172, 107746, https://doi.org/10.1016/j.envint.2023.107746
Sountoulidis A, Marco Salas S, Braun E, …, Nilsson M, Samakovlis C, “A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.”, Nat Cell Biol, 2023, 25 (2), 351-365, https://doi.org/10.1038/s41556-022-01064-x
Rahimi S, van Leeuwen D, Roshanzamir F, …, Esbjörner EK, Mijakovic I, “Ginsenoside Rg3 Reduces the Toxicity of Graphene Oxide Used for pH-Responsive Delivery of Doxorubicin to Liver and Breast Cancer Cells.”, Pharmaceutics, 2023, 15 (2), https://doi.org/10.3390/pharmaceutics15020391
Forsberg KM, Graffmo KS, Stenvall E, …, Brännström T, Andersen PM, “Widespread CNS pathology in amyotrophic lateral sclerosis homozygous for the D90A SOD1 mutation”, Acta Neuropathol, 2023, 145 (1), 13-28, https://doi.org/10.1007/s00401-022-02519-z
Zäll E, Järn M, Karlsson S, …, Sundin M, Wågberg T, “Aerosol-based deposition of broadband antireflective silica coating with closed mesoporous structure”, Solar Energy Materials and Solar Cells, 2023, 250, 112078, https://doi.org/10.1016/j.solmat.2022.112078
Behanova A, Avenel C, Andersson A, …, Östman A, Wählby C, “Visualization and quality control tools for large-scale multiplex tissue analysis in TissUUmaps3”, Biol. Imaging, 2023, 3, https://doi.org/10.1017/s2633903x23000053
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Wilhelmsson U, Lebkuechner I, Leke R, …, Pekna M, Pekny M, “Nestin Regulates Neurogenesis in Mice Through Notch Signaling From Astrocytes to Neural Stem Cells.”, Cereb. Cortex, 2019, 29 (10), 4050-4066, https://doi.org/10.1093/cercor/bhy284
Wurm CA, Schwarz H, Jans DC, …, Humbel BM, Jakobs S, “Correlative STED super-resolution light and electron microscopy on resin sections”, J. Phys. D: Appl. Phys., 2019, 52 (37), 374003, https://doi.org/10.1088/1361-6463/ab2b31
de Pablo Y, Marasek P, Pozo-Rodrigálvarez A, …, Pekna M, Pekny M, “Vimentin Phosphorylation Is Required for Normal Cell Division of Immature Astrocytes.”, Cells, 2019, 8 (9), 1016, https://doi.org/10.3390/cells8091016
Hu M, Zhang Y, Guo X, …, Shao LR, Billig H, “Perturbed ovarian and uterine glucocorticoid receptor signaling accompanies the balanced regulation of mitochondrial function and NFκB-mediated inflammation under conditions of hyperandrogenism and insulin resistance.”, Life Sciences, 2019, 232, 116681, https://doi.org/10.1016/j.lfs.2019.116681
Lázaro-Ibáñez E, Lässer C, Shelke GV, …, García-Rodríguez A, Lötvall J, “DNA analysis of low- and high-density fractions defines heterogeneous subpopulations of small extracellular vesicles based on their DNA cargo and topology.”, J Extracell Vesicles, 2019, 8 (1), 1656993, https://doi.org/10.1080/20013078.2019.1656993
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Kouznetsova A, Kitajima TS, Brismar H, Höög C, “Post-metaphase correction of aberrant kinetochore-microtubule attachments in mammalian eggs.”, EMBO Rep., 2019, 20 (8), e47905, https://doi.org/10.15252/embr.201947905
Lammel T, Wassmur B, Mackevica A, Chen CL, Sturve J, “Mixture toxicity effects and uptake of titanium dioxide (TiO 2) nanoparticles and 3,3′,4,4′-tetrachlorobiphenyl (PCB77) in juvenile brown trout following co-exposure via the diet.”, Aquat. Toxicol., 2019, 213, 105195, https://doi.org/10.1016/j.aquatox.2019.04.021
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Ranade SS, Delhomme N, García-Gil MR, “Global gene expression analysis in etiolated and de-etiolated seedlings in conifers.”, PLoS ONE, 2019, 14 (7), e0219272, https://doi.org/10.1371/journal.pone.0219272
Laraia L, Friese A, Corkery DP, …, Wu YW, Waldmann H, “The cholesterol transfer protein GRAMD1A regulates autophagosome biogenesis.”, Nat. Chem. Biol., 2019, 15 (7), 710-720, https://doi.org/10.1038/s41589-019-0307-5
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Bengtsson E, Ranefall P, “Image Analysis in Digital Pathology: Combining Automated Assessment of Ki67 Staining Quality with Calculation of Ki67 Cell Proliferation Index.”, Cytometry A, 2019, 95 (7), 714-716, https://doi.org/10.1002/cyto.a.23685
Mottahedin A, Joakim Ek C, Truvé K, Hagberg H, Mallard C, “Choroid plexus transcriptome and ultrastructure analysis reveals a TLR2-specific chemotaxis signature and cytoskeleton remodeling in leukocyte trafficking.”, Brain, Behavior, and Immunity, 2019, 79, 216-227, https://doi.org/10.1016/j.bbi.2019.02.004
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Stoldt S, Stephan T, Jans DC, …, Hell SW, Jakobs S, “Mic60 exhibits a coordinated clustered distribution along and across yeast and mammalian mitochondria.”, Proc. Natl. Acad. Sci. U.S.A., 2019, 116 (20), 9853-9858, https://doi.org/10.1073/pnas.1820364116
Nilsson LM, Zhang L, Bondar A, …, Scott L, Aperia A, “Prompt apoptotic response to high glucose in SGLT-expressing renal cells.”, Am. J. Physiol. Renal Physiol., 2019, 316 (5), F1078-F1089, https://doi.org/10.1152/ajprenal.00615.2018
Lundberg E, Borner GHH, “Spatial proteomics: a powerful discovery tool for cell biology.”, Nat Rev Mol Cell Biol, 2019, 20 (5), 285-302, https://doi.org/10.1038/s41580-018-0094-y
Maier DB, Diehl S, Bigler C, “Interannual variation in seasonal diatom sedimentation reveals the importance of late winter processes and their timing for sediment signal formation”, Limnol Oceanogr, 2019, 64 (3), 1186-1199, https://doi.org/10.1002/lno.11106
Lammel T, Mackevica A, Johansson BR, Sturve J, “Endocytosis, intracellular fate, accumulation, and agglomeration of titanium dioxide (TiO 2) nanoparticles in the rainbow trout liver cell line RTL-W1.”, Environ Sci Pollut Res, 2019, 26 (15), 15354-15372, https://doi.org/10.1007/s11356-019-04856-1
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Michno W, Nyström S, Wehrli P, …, Zetterberg H, Hanrieder J, “Pyroglutamation of amyloid-βx-42 (Aβx-42) followed by Aβ1-40 deposition underlies plaque polymorphism in progressing Alzheimer’s disease pathology.”, J. Biol. Chem., 2019, 294 (17), 6719-6732, https://doi.org/10.1074/jbc.RA118.006604
Kwong WL, Lee CC, Shchukarev A, Messinger J, “Cobalt-doped hematite thin films for electrocatalytic water oxidation in highly acidic media.”, Chem. Commun. (Camb.), 2019, 55 (34), 5017-5020, https://doi.org/10.1039/c9cc01369e
Johansson HJ, Socciarelli F, Vacanti NM, …, Børresen-Dale AL, Lehtiö J, “Breast cancer quantitative proteome and proteogenomic landscape.”, Nat Commun, 2019, 10 (1), 1600, https://doi.org/10.1038/s41467-019-09018-y
Peter B, Farge G, Pardo-Hernandez C, Tångefjord S, Falkenberg M, “Structural basis for adPEO-causing mutations in the mitochondrial TWINKLE helicase.”, Hum. Mol. Genet., 2019, 28 (7), 1090-1099, https://doi.org/10.1093/hmg/ddy415
Karras C, Smedh M, Förster R, …, Fernandez-Rodriguez J, Heintzmann R, “Successful optimization of reconstruction parameters in structured illumination microscopy – A practical guide”, Optics Communications, 2019, 436, 69-75, https://doi.org/10.1016/j.optcom.2018.12.005
Gupta A, Harrison PJ, Wieslander H, …, Sintorn IM, Wählby C, “Deep Learning in Image Cytometry: A Review.”, Cytometry A, 2019, 95 (4), 366-380, https://doi.org/10.1002/cyto.a.23701
Suarez C, Piculell M, Modin O, …, Persson F, Hermansson M, “Thickness determines microbial community structure and function in nitrifying biofilms via deterministic assembly.”, Sci Rep, 2019, 9 (1), 5110, https://doi.org/10.1038/s41598-019-41542-1
Strandberg A, Skoglund N, Thyrel M, …, Broström M, Backman R, “Time-Resolved Study of Silicate Slag Formation During Combustion of Wheat Straw Pellets”, Energy Fuels, 2019, 33 (3), 2308-2318, https://doi.org/10.1021/acs.energyfuels.8b04294
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Fontana JM, Khodus GR, Unnersjö-Jess D, …, Aperia A, Brismar H, “Spontaneous calcium activity in metanephric mesenchymal cells regulates branching morphogenesis in the embryonic kidney.”, FASEB J., 2019, 33 (3), 4089-4096, https://doi.org/10.1096/fj.201802054R
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Pettersson M, Pettersson J, Johansson A, Molin Thorén M, “Titanium release in peri-implantitis.”, J Oral Rehabil, 2019, 46 (2), 179-188, https://doi.org/10.1111/joor.12735
Corman A, Jung B, Häggblad M, …, Carreras-Puigvert J, Fernandez-Capetillo O, “A Chemical Screen Identifies Compounds Limiting the Toxicity of C9ORF72 Dipeptide Repeats”, Cell Chem Biol, 2019, 26 (2), 235-243.e5, https://doi.org/10.1016/j.chembiol.2018.10.020
Moodie LWK, Hubert M, Zhou X, …, Wanrooij S, Hedberg C, “Photoactivated Colibactin Probes Induce Cellular DNA Damage.”, Angew. Chem. Int. Ed. Engl., 2019, 58 (5), 1417-1421, https://doi.org/10.1002/anie.201812326
Wang T, Zhang J, Hu M, …, Shao LR, Billig H, “Differential Expression Patterns of Glycolytic Enzymes and Mitochondria-Dependent Apoptosis in PCOS Patients with Endometrial Hyperplasia, an Early Hallmark of Endometrial Cancer, In Vivo and the Impact of Metformin In Vitro.”, Int. J. Biol. Sci., 2019, 15 (3), 714-725, https://doi.org/10.7150/ijbs.31425
Kozyatnyk I, Latham KG, Jansson S, “Valorization of Humic Acids by Hydrothermal Conversion into Carbonaceous Materials: Physical and Functional Properties”, ACS Sustainable Chem. Eng., 2019, 7 (2), 2585-2592, https://doi.org/10.1021/acssuschemeng.8b05614
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2018
Ašmonaitė G, Sundh H, Asker N, Carney Almroth B, “Rainbow Trout Maintain Intestinal Transport and Barrier Functions Following Exposure to Polystyrene Microplastics.”, Environ. Sci. Technol., 2018, 52 (24), 14392-14401, https://doi.org/10.1021/acs.est.8b04848
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Micaroni M, “Looking for a Treatment for Hailey-Hailey Disease: The Importance of Being Consistent in Case Reports.”, J Cutan Med Surg, 2018, 22 (6), 660, https://doi.org/10.1177/1203475418798021
Pudelko L, Edwards S, Balan M, …, Helleday T, Bräutigam L, “An orthotopic glioblastoma animal model suitable for high-throughput screenings.”, Neuro-oncology, 2018, 20 (11), 1475-1484, https://doi.org/10.1093/neuonc/noy071
Dusart P, Fagerberg L, Perisic L, …, Odeberg J, Butler LM, “A systems-approach reveals human nestin is an endothelial-enriched, angiogenesis-independent intermediate filament protein.”, Sci Rep, 2018, 8 (1), 14668, https://doi.org/10.1038/s41598-018-32859-4
Thomsen H, Graf FE, Farewell A, Ericson MB, “Exploring photoinactivation of microbial biofilms using laser scanning microscopy and confined 2-photon excitation.”, J. Biophotonics, 2018, 11 (10), e201800018, https://doi.org/10.1002/jbio.201800018
Sullivan DP, Winsnes CF, Åkesson L, …, Szantner A, Lundberg E, “Deep learning is combined with massive-scale citizen science to improve large-scale image classification”, Nat Biotechnol, 2018, 36 (9), 820-828, https://doi.org/10.1038/nbt.4225
Hofmeister W, Vaz R, Edwards S, Dueñas Rey A, Lindstrand A, “Loss of zebrafish ctnnd2b results in disorganised forebrain neuron clusters”,, 2018, https://doi.org/10.1101/420828
Fernández-Blanco JA, Fakih D, Arike L, …, Ermund A, Hansson GC, “Attached stratified mucus separates bacteria from the epithelial cells in COPD lungs.”, JCI Insight, 2018, 3 (17), https://doi.org/10.1172/jci.insight.120994
Echbarthi M, Vallin J, Grantham J, “Interactions between monomeric CCTδ and p150 Glued: A novel function for CCTδ at the cell periphery distinct from the protein folding activity of the molecular chaperone CCT.”, Exp. Cell Res., 2018, 370 (1), 137-149, https://doi.org/10.1016/j.yexcr.2018.06.018
Sütt S, Cansby E, Paul A, …, Enerbäck S, Mahlapuu M, “STK25 regulates oxidative capacity and metabolic efficiency in adipose tissue.”, J Endocrinol, 2018, 238 (3), 187-202, https://doi.org/10.1530/JOE-18-0182
Bodhicharla R, Devkota R, Ruiz M, Pilon M, “Membrane Fluidity Is Regulated Cell Nonautonomously by Caenorhabditiselegans PAQR-2 and Its Mammalian Homolog AdipoR2.”, Genetics, 2018, 210 (1), 189-201, https://doi.org/10.1534/genetics.118.301272
Lizatović R, Assent M, Barendregt A, …, Wennmalm S, André I, “A Protein-Based Encapsulation System with Calcium-Controlled Cargo Loading and Detachment”, Angew. Chem. Int. Ed., 2018, 57 (35), 11334-11338, https://doi.org/10.1002/anie.201806466
Karimi N, Cvjetkovic A, Jang SC, …, Lötvall J, Lässer C, “Detailed analysis of the plasma extracellular vesicle proteome after separation from lipoproteins”, Cell. Mol. Life Sci., 2018, 75 (15), 2873-2886, https://doi.org/10.1007/s00018-018-2773-4
Liebmann T, Fritz N, Kruusmägi M, …, Aperia A, Brismar H, “Regulation of Neuronal Na,K-ATPase by Extracellular Scaffolding Proteins.”, Int J Mol Sci, 2018, 19 (8), 2214, https://doi.org/10.3390/ijms19082214
Mottram L, Liu J, Chavan S, …, Svennerholm AM, Holgersson J, “Glyco-engineered cell line and computational docking studies reveals enterotoxigenic Escherichia coli CFA/I fimbriae bind to Lewis a glycans.”, Sci Rep, 2018, 8 (1), 11250, https://doi.org/10.1038/s41598-018-29258-0
Michno W, Kaya I, Nyström S, …, Zetterberg H, Hanrieder J, “Multimodal Chemical Imaging of Amyloid Plaque Polymorphism Reveals Aβ Aggregation Dependent Anionic Lipid Accumulations and Metabolism.”, Anal. Chem., 2018, 90 (13), 8130-8138, https://doi.org/10.1021/acs.analchem.8b01361
Gibbs A, Buggert M, Edfeldt G, …, Broliden K, Tjernlund A, “Human Immunodeficiency Virus-Infected Women Have High Numbers of CD103-CD8+ T Cells Residing Close to the Basal Membrane of the Ectocervical Epithelium.”, J. Infect. Dis., 2018, 218 (3), 453-465, https://doi.org/10.1093/infdis/jix661
Siwani S, França ASC, Mikulovic S, …, Tort ABL, Kullander K, “OLMα2 Cells Bidirectionally Modulate Learning”, Neuron, 2018, 99 (2), 404-412.e3, https://doi.org/10.1016/j.neuron.2018.06.022
Holzwarth K, Köhler R, Philipsen L, …, Niesner RA, Hauser AE, “Multiplexed fluorescence microscopy reveals heterogeneity among stromal cells in mouse bone marrow sections”, Cytometry, 2018, 93 (9), 876-888, https://doi.org/10.1002/cyto.a.23526
Chen M, Puschmann TB, Marasek P, …, Wilhelmsson U, Pekny M, “Increased Neuronal Differentiation of Neural Progenitor Cells Derived from Phosphovimentin-Deficient Mice.”, Mol Neurobiol, 2018, 55 (7), 5478-5489, https://doi.org/10.1007/s12035-017-0759-0
Nyström EEL, Birchenough GMH, van der Post S, …, Hansson GC, Johansson MEV, “Calcium-activated Chloride Channel Regulator 1 (CLCA1) Controls Mucus Expansion in Colon by Proteolytic Activity.”, EBioMedicine, 2018, 33, 134-143, https://doi.org/10.1016/j.ebiom.2018.05.031
Lammel T, Sturve J, “Assessment of titanium dioxide nanoparticle toxicity in the rainbow trout (Onchorynchus mykiss) liver and gill cell lines RTL-W1 and RTgill-W1 under particular consideration of nanoparticle stability and interference with fluorometric assays”, NanoImpact, 2018, 11, 1-19, https://doi.org/10.1016/j.impact.2018.01.001
Thomsen H, Marino N, Conoci S, Sortino S, Ericson MB, “Confined photo-release of nitric oxide with simultaneous two-photon fluorescence tracking in a cellular system.”, Sci Rep, 2018, 8 (1), 9753, https://doi.org/10.1038/s41598-018-27939-4
De Vadder F, Grasset E, Mannerås Holm L, …, Olofsson LE, Bäckhed F, “Gut microbiota regulates maturation of the adult enteric nervous system via enteric serotonin networks.”, Proc. Natl. Acad. Sci. U.S.A., 2018, 115 (25), 6458-6463, https://doi.org/10.1073/pnas.1720017115
Gunasekera S, Fernandes-Cerqueira C, Wennmalm S, …, Jakobsson PJ, Göransson U, “Stabilized Cyclic Peptides as Scavengers of Autoantibodies: Neutralization of Anticitrullinated Protein/Peptide Antibodies in Rheumatoid Arthritis”, ACS Chem. Biol., 2018, 13 (6), 1525-1535, https://doi.org/10.1021/acschembio.8b00118
Spiess M, Hernandez-Varas P, Oddone A, …, Lakadamyali M, Strömblad S, “Active and inactive β1 integrins segregate into distinct nanoclusters in focal adhesions.”, J. Cell Biol., 2018, 217 (6), 1929-1940, https://doi.org/10.1083/jcb.201707075
Yu Y, Jans DC, Winblad B, Tjernberg LO, Schedin-Weiss S, “Neuronal Aβ42 is enriched in small vesicles at the presynaptic side of synapses.”, Life Sci. Alliance, 2018, 1 (3), e201800028, https://doi.org/10.26508/lsa.201800028
Bram Ednersson S, Stenson M, Stern M, …, Hasselblom S, Andersson PO, “Expression of ribosomal and actin network proteins and immunochemotherapy resistance in diffuse large B cell lymphoma patients”, Br J Haematol, 2018, 181 (6), 770-781, https://doi.org/10.1111/bjh.15259
Nguyen DT, O’Hara M, Graneli C, …, Althage M, Heydarkhan-Hagvall S, “Humanizing Miniature Hearts through 4-Flow Cannulation Perfusion Decellularization and Recellularization.”, Sci Rep, 2018, 8 (1), 7458, https://doi.org/10.1038/s41598-018-25883-x
Lindström L, Li T, Malycheva D, …, Rosselló CA, Alvarado-Kristensson M, “The GTPase domain of gamma-tubulin is required for normal mitochondrial function and spatial organization.”, Commun Biol, 2018, 1 (1), 37, https://doi.org/10.1038/s42003-018-0037-3
Hu M, Zhang Y, Feng J, …, Shao LR, Billig H, “Uterine progesterone signaling is a target for metformin therapy in PCOS-like rats.”, J Endocrinol, 2018, 237 (2), 123-137, https://doi.org/10.1530/JOE-18-0086
Wennmalm S, “Potentials and pitfalls of inverse fluorescence correlation spectroscopy”, Methods, 2018, 140-141, 23-31, https://doi.org/10.1016/j.ymeth.2018.01.005
von der Heyde B, Masiero M, Emmanouilidou A, Klingström T, den Hoed M, “Abstract 472: Identifying and Characterizing Causal Genes in GWAS-identified Loci for Triglyceride Levels Using High-throughput, Image-based Screens in Zebrafish Larvae”, Arterioscler. Thromb. Vasc. Biol., 2018, 38 (Suppl_1), https://doi.org/10.1161/atvb.38.suppl_1.472
Bernhem K, Blom H, Brismar H, “Quantification of endogenous and exogenous protein expressions of Na,K-ATPase with super-resolution PALM/STORM imaging.”, PLoS ONE, 2018, 13 (4), e0195825, https://doi.org/10.1371/journal.pone.0195825
Guala D, Bernhem K, Blal HA, …, Brismar H, Sonnhammer ELL, “Experimental validation of predicted cancer genes using FRET”, Methods Appl. Fluoresc., 2018, 6 (3), 035007, https://doi.org/10.1088/2050-6120/aab932
Trillo-Muyo S, Nilsson HE, Recktenwald CV, …, Hebert H, Hansson GC, “Granule-stored MUC5B mucins are packed by the non-covalent formation of N-terminal head-to-head tetramers.”, J. Biol. Chem., 2018, 293 (15), 5746-5754, https://doi.org/10.1074/jbc.RA117.001014
Werner T, Kumar R, Horvath I, Scheers N, Wittung-Stafshede P, “Abundant fish protein inhibits α-synuclein amyloid formation.”, Sci Rep, 2018, 8 (1), 5465, https://doi.org/10.1038/s41598-018-23850-0
Hofving T, Arvidsson Y, Almobarak B, …, Johanson V, Nilsson O, “The neuroendocrine phenotype, genomic profile and therapeutic sensitivity of GEPNET cell lines. Correction”, Endocr Relat Cancer, 2018, 25 (4), X1-X2, https://doi.org/10.1530/erc-17-0445e
Casselbrant A, Helander HF, “Effects of fixation on electrophysiology and structure of human jejunal villi.”, Microsc Res Tech, 2018, 81 (4), 376-383, https://doi.org/10.1002/jemt.22988
Unnersjö-Jess D, Scott L, Sevilla SZ, …, Blom H, Brismar H, “Confocal super-resolution imaging of the glomerular filtration barrier enabled by tissue expansion”, Kidney International, 2018, 93 (4), 1008-1013, https://doi.org/10.1016/j.kint.2017.09.019
Niu Z, Pontifex CS, Berini S, …, Pfeffer G, Milone M, “Myopathy With SQSTM1 and TIA1 Variants: Clinical and Pathological Features.”, Front Neurol, 2018, 9, 147, https://doi.org/10.3389/fneur.2018.00147
Mönnich M, Borgeskov L, Breslin L, …, Larsen LA, Pedersen LB, “CEP128 Localizes to the Subdistal Appendages of the Mother Centriole and Regulates TGF-β/BMP Signaling at the Primary Cilium.”, Cell Rep, 2018, 22 (10), 2584-2592, https://doi.org/10.1016/j.celrep.2018.02.043
Agostinho A, Kouznetsova A, Hernández-Hernández A, …, Brismar H, Höög C, “Sexual dimorphism in the width of the mouse synaptonemal complex”, J Cell Sci, 2018, 131 (5), jcs212548, https://doi.org/10.1242/jcs.212548
Hofving T, Arvidsson Y, Almobarak B, …, Johanson V, Nilsson O, “The neuroendocrine phenotype, genomic profile and therapeutic sensitivity of GEPNET cell lines.”, Endocr. Relat. Cancer, 2018, 25 (3), 367-380, https://doi.org/10.1530/ERC-17-0445
Wang X, Omar O, Vazirisani F, Thomsen P, Ekström K, “Mesenchymal stem cell-derived exosomes have altered microRNA profiles and induce osteogenic differentiation depending on the stage of differentiation.”, PLoS ONE, 2018, 13 (2), e0193059, https://doi.org/10.1371/journal.pone.0193059
Staaf E, Hedde PN, Bagawath Singh S, …, Gratton E, Johansson S, “Educated natural killer cells show dynamic movement of the activating receptor NKp46 and confinement of the inhibitory receptor Ly49A”, Sci. Signal., 2018, 11 (517), eaai9200, https://doi.org/10.1126/scisignal.aai9200
Zhang H, Ericsson M, Virtanen M, …, Vahlquist A, Törmä H, “Quantitative image analysis of protein expression and colocalisation in skin sections”, Exp Dermatol, 2018, 27 (2), 196-199, https://doi.org/10.1111/exd.13457
Schroeder BO, Birchenough GMH, Ståhlman M, …, Hansson GC, Bäckhed F, “Bifidobacteria or Fiber Protects against Diet-Induced Microbiota-Mediated Colonic Mucus Deterioration.”, Cell Host Microbe, 2018, 23 (1), 27-40.e7, https://doi.org/10.1016/j.chom.2017.11.004
Bernhem K, Brismar H, “SMLocalizer, a GPU accelerated ImageJ plugin for single molecule localization microscopy”, Bioinformatics, 2018, 34 (1), 137-138, https://doi.org/10.1093/bioinformatics/btx553
Lindström L, Alvarado-Kristensson M, “Characterization of gamma-tubulin filaments in mammalian cells.”, Biochimica et Biophysica Acta (BBA) – Molecular Cell Research, 2018, 1865 (1), 158-171, https://doi.org/10.1016/j.bbamcr.2017.10.008
2017
Solorzano L, Almeida GM, Mesquita B, …, Oliveira C, Wählby C, “Whole Slide Image Registration for the Study of Tumor Heterogeneity”,, 2018, 95-102, https://doi.org/10.1007/978-3-030-00949-6_12
Boström J, Sramkova Z, Salašová A, …, Altun M, Andäng M, “Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells”, PLoS ONE, 2017, 12 (12), e0188772, https://doi.org/10.1371/journal.pone.0188772
Agholme L, Clarin M, Gkanatsiou E, …, Portelius E, Zetterberg H, “Low-dose γ-secretase inhibition increases secretion of Aβ peptides and intracellular oligomeric Aβ.”, Molecular and Cellular Neuroscience, 2017, 85, 211-219, https://doi.org/10.1016/j.mcn.2017.10.009
Sadanandan SK, Ranefall P, Le Guyader S, Wählby C, “Automated Training of Deep Convolutional Neural Networks for Cell Segmentation”, Sci Rep, 2017, 7 (1), https://doi.org/10.1038/s41598-017-07599-6
Petersen J, Wright SC, Rodríguez D, …, Carlsson J, Schulte G, “Agonist-induced dimer dissociation as a macromolecular step in G protein-coupled receptor signaling”, Nat Commun, 2017, 8 (1), https://doi.org/10.1038/s41467-017-00253-9
Carreras-Puigvert J, Zitnik M, Jemth AS, …, Zupan B, Helleday T, “A comprehensive structural, biochemical and biological profiling of the human NUDIX hydrolase family”, Nat Commun, 2017, 8 (1), https://doi.org/10.1038/s41467-017-01642-w
Matuszewski DJ, Hast A, Wählby C, Sintorn IM, “A short feature vector for image matching: The Log-Polar Magnitude feature descriptor.”, PLoS ONE, 2017, 12 (11), e0188496, https://doi.org/10.1371/journal.pone.0188496
Röhl M, Lajoie J, Tjernlund A, …, Fowke KR, Broliden K, “Highly HIV-exposed HIV uninfected Kenyan female sex workers display a thick ectocervical epithelium”, HIV&Hepatitis Nordic Conference, Stockholm, 2017-09-27-29, 2017
Bombrun M, Gao H, Ranefall P, …, Arner P, Wählby C, “Quantitative high-content/high-throughput microscopy analysis of lipid droplets in subject-specific adipogenesis models.”, Cytometry A, 2017, 91 (11), 1068-1077, https://doi.org/10.1002/cyto.a.23265
Ly T, Whigham A, Clarke R, …, Wadsworth P, Lamond AI, “Proteomic analysis of cell cycle progression in asynchronous cultures, including mitotic subphases, using PRIMMUS.”, Elife, 2017, 6, https://doi.org/10.7554/eLife.27574
Emmanouilidou A, Ranefall P, Bandaru M, …, Ingelsson E, den Hoed M, “Zebrafish larvae as a model system for high-throughput, image-based screens in diabetes and insulin resistance”, ASHG 2017 Annual Meeting – The American Society of Human Genetics, 2017
den Hoed M, Emmanouilidou A, Bandaru M, …, Larsson A, Ingelsson E, “Zebrafish larvae as a model system for high-throughput, image-based genetic screens in cardiometabolic diseases”, ASHG 2017 Annual Meeting – The American Society of Human Genetics, 2017
Bandaru M, Emmanouilidou A, Ranefall P, …, Ingelsson E, den Hoed M, “Large-scale validation of zebrafish larvae as a model system for genetic screens in dyslipidaemia, atherosclerosis and coronary artery disease”, ASHG 2017 Annual Meeting – The American Society of Human Genetics, 2017
Pudelko L, Rouhi P, Sanjiv K, …, Helleday T, Bräutigam L, “Glioblastoma and glioblastoma stem cells are dependent on functional MTH1.”, Oncotarget, 2017, 8 (49), 84671-84684, https://doi.org/10.18632/oncotarget.19404
Ribeiro D, Horvath I, Heath N, …, Forslöw A, Wittung-Stafshede P, “Extracellular vesicles from human pancreatic islets suppress human islet amyloid polypeptide amyloid formation.”, Proc. Natl. Acad. Sci. U.S.A., 2017, 114 (42), 11127-11132, https://doi.org/10.1073/pnas.1711389114
Thomsen H, Benkovics G, Fenyvesi É, …, Malanga M, Ericson MB, “Delivery of cyclodextrin polymers to bacterial biofilms – An exploratory study using rhodamine labelled cyclodextrins and multiphoton microscopy.”, Int J Pharm, 2017, 531 (2), 650-657, https://doi.org/10.1016/j.ijpharm.2017.06.011
Sadanandan SK, Karlsson J, Wahlby C, “Spheroid Segmentation Using Multiscale Deep Adversarial Networks”, The IEEE International Conference on Computer Vision (ICCV), 2017, 2017, 36-41, https://doi.org/10.1109/iccvw.2017.11
Edfeldt G, Lajoie J, Röhl M, Tjernlund A, “Hormonal contraceptive use affects HIV susceptibility: mechanisms revealed by image analysis”, Scand J Immunol, 2017, 86 (4), 249-350
Forslid G, Wieslander H, Bengtsson E, …, Stark CR, Sadanandan SK, “Deep Convolutional Neural Networks for Detecting Cellular Changes Due to Malignancy”, The IEEE International Conference on Computer Vision (ICCV), 2017, 2017, https://doi.org/10.1109/iccvw.2017.18
Sun JB, Holmgren J, Larena M, …, Bresnick AR, Xiang Z, “Deficiency in Calcium-Binding Protein S100A4 Impairs the Adjuvant Action of Cholera Toxin.”, Front Immunol, 2017, 8, 1119, https://doi.org/10.3389/fimmu.2017.01119
Abrahamsson S, Blom H, Agostinho A, …, Heintzmann R, Brismar H, “Multifocus structured illumination microscopy for fast volumetric super-resolution imaging”, Biomed. Opt. Express, 2017, 8 (9), 4135, https://doi.org/10.1364/boe.8.004135
Devkota R, Svensk E, Ruiz M, …, Borén J, Pilon M, “The adiponectin receptor AdipoR2 and its Caenorhabditis elegans homolog PAQR-2 prevent membrane rigidification by exogenous saturated fatty acids.”, PLoS Genet., 2017, 13 (9), e1007004, https://doi.org/10.1371/journal.pgen.1007004
Gliga AR, Edoff K, Caputo F, …, Ceccatelli S, Fadeel B, “Cerium oxide nanoparticles inhibit differentiation of neural stem cells.”, Sci Rep, 2017, 7 (1), 9284, https://doi.org/10.1038/s41598-017-09430-8
Fernandez-Rodriguez J, Nilsson T, “Membrane trafficking under the microscope, what new imaging technologies have brought to light”, CRC Press, 2017, 1st Edition
Svensson S, Trobos M, Omar O, Thomsen P, “Site-specific gene expression analysis of implant-near cells in a soft tissue infection model – Application of laser microdissection to study biomaterial-associated infection.”, J. Biomed. Mater. Res., 2017, 105 (8), 2210-2217, https://doi.org/10.1002/jbm.a.36088
Talebizadeh N, Hagström NZ, Yu Z, …, Söderberg P, Wählby C, “Objective automated quantification of fluorescence signal in histological sections of rat lens”, Cytometry, 2017, 91 (8), 815-821, https://doi.org/10.1002/cyto.a.23131
Liu W, Li H, Edin F, …, Pfaller K, Rask-Andersen H, “Molecular composition and distribution of gap junctions in the sensory epithelium of the human cochlea-a super-resolution structured illumination microscopy (SR-SIM) study.”, Ups. J. Med. Sci., 2017, 122 (3), 160-170, https://doi.org/10.1080/03009734.2017.1322645
Bao J, Huang M, Petranovic D, Nielsen J, “Moderate Expression of SEC16 Increases Protein Secretion by Saccharomyces cerevisiae.”, Appl. Environ. Microbiol., 2017, 83 (14), https://doi.org/10.1128/AEM.03400-16
Blom H, Widengren J, “Stimulated Emission Depletion Microscopy.”, Chem. Rev., 2017, 117 (11), 7377-7427, https://doi.org/10.1021/acs.chemrev.6b00653
Wilhelmsson U, Andersson D, de Pablo Y, …, Pekny M, Pekna M, “Injury Leads to the Appearance of Cells with Characteristics of Both Microglia and Astrocytes in Mouse and Human Brain.”, Cereb. Cortex, 2017, 27 (6), 3360-3377, https://doi.org/10.1093/cercor/bhx069
Thul PJ, Åkesson L, Wiking M, …, Uhlén M, Lundberg E, “A subcellular map of the human proteome.”, Science, 2017, 356 (6340), https://doi.org/10.1126/science.aal3321
Monterisi S, Lobo MJ, Livie C, …, Micaroni M, Zaccolo M, “PDE2A2 regulates mitochondria morphology and apoptotic cell death via local modulation of cAMP/PKA signalling.”, Elife, 2017, 6, https://doi.org/10.7554/eLife.21374
Kaya I, Michno W, Brinet D, …, Zetterberg H, Hanrieder J, “Histology-Compatible MALDI Mass Spectrometry Based Imaging of Neuronal Lipids for Subsequent Immunofluorescent Staining.”, Anal. Chem., 2017, 89 (8), 4685-4694, https://doi.org/10.1021/acs.analchem.7b00313
Kaucka M, Zikmund T, Tesarova M, …, Fried K, Adameyko I, “Oriented clonal cell dynamics enables accurate growth and shaping of vertebrate cartilage”, Elife, 2017, 6, https://doi.org/10.7554/elife.25902
Winsnes CF, Sullivan DP, Smith K, Lundberg E, “Multi-label prediction of subcellular localization in confocal images using deep neural networks”, Molecular Biology of the Cell, 2017, 27
Morán J, Stokowska A, Walker FR, …, Hagberg H, Pekna M, “Intranasal C3a treatment ameliorates cognitive impairment in a mouse model of neonatal hypoxic-ischemic brain injury.”, Exp. Neurol., 2017, 290, 74-84, https://doi.org/10.1016/j.expneurol.2017.01.001
Micaroni M, “Editorial for the special issue on “Golgi-related human disorders”.”, Tissue and Cell, 2017, 49 (2 Pt A), 131-132, https://doi.org/10.1016/j.tice.2017.03.004
Skjolding LM, Ašmonaitė G, Jølck RI, …, Baun A, Sturve J, “An assessment of the importance of exposure routes to the uptake and internal localisation of fluorescent nanoparticles in zebrafish (Danio rerio), using light sheet microscopy.”, Nanotoxicology, 2017, 11 (3), 351-359, https://doi.org/10.1080/17435390.2017.1306128
Bodvard K, Peeters K, Roger F, …, Käll M, Molin M, “Light-sensing via hydrogen peroxide and a peroxiredoxin.”, Nat Commun, 2017, 8 (1), 14791, https://doi.org/10.1038/ncomms14791
Vidal-Quadras M, Holst MR, Francis MK, …, Martín-Belmonte F, Lundmark R, “Endocytic turnover of Rab8 controls cell polarization.”, J. Cell. Sci., 2017, 130 (6), 1147-1157, https://doi.org/10.1242/jcs.195420
Borglin J, Selegård R, Aili D, Ericson MB, “Peptide Functionalized Gold Nanoparticles as a Stimuli Responsive Contrast Medium in Multiphoton Microscopy.”, Nano Lett., 2017, 17 (3), 2102-2108, https://doi.org/10.1021/acs.nanolett.7b00611
Birchenough GM, Dalgakiran F, Witcomb LA, …, Hansson GC, Taylor PW, “Postnatal development of the small intestinal mucosa drives age-dependent, regio-selective susceptibility to Escherichia coli K1 infection.”, Sci Rep, 2017, 7 (1), 83, https://doi.org/10.1038/s41598-017-00123-w
Reuss M, Fördős F, Blom H, …, Högberg B, Brismar H, “Measuring true localization accuracy in super resolution microscopy with DNA-origami nanostructures”, New J. Phys., 2017, 19 (2), 025013, https://doi.org/10.1088/1367-2630/aa5f74
Alkasalias T, Alexeyenko A, Hennig K, …, Gad AK, Pavlova T, “RhoA knockout fibroblasts lose tumor-inhibitory capacity in vitro and promote tumor growth in vivo.”, Proc. Natl. Acad. Sci. U.S.A., 2017, 114 (8), E1413-E1421, https://doi.org/10.1073/pnas.1621161114
Kaya I, Brinet D, Michno W, …, Blennow K, Hanrieder J, “Delineating Amyloid Plaque Associated Neuronal Sphingolipids in Transgenic Alzheimer’s Disease Mice (tgArcSwe) Using MALDI Imaging Mass Spectrometry.”, ACS Chem Neurosci, 2017, 8 (2), 347-355, https://doi.org/10.1021/acschemneuro.6b00391
Risal S, Zhang J, Adhikari D, …, Kaldis P, Liu K, “MASTL is essential for anaphase entry of proliferating primordial germ cells and establishment of female germ cells in mice.”, Cell Discov, 2017, 3 (1), 16052, https://doi.org/10.1038/celldisc.2016.52
Stokowska A, Atkins AL, Morán J, …, Dragunow M, Pekna M, “Complement peptide C3a stimulates neural plasticity after experimental brain ischaemia.”, Brain, 2017, 140 (2), 353-369, https://doi.org/10.1093/brain/aww314
Blockhuys S, Wittung-Stafshede P, “Copper chaperone Atox1 plays role in breast cancer cell migration.”, Biochem. Biophys. Res. Commun., 2017, 483 (1), 301-304, https://doi.org/10.1016/j.bbrc.2016.12.148
Dolatabadi S, Candia J, Akrap N, …, Åman P, Ståhlberg A, “Cell Cycle and Cell Size Dependent Gene Expression Reveals Distinct Subpopulations at Single-Cell Level.”, Front Genet, 2017, 8, 1, https://doi.org/10.3389/fgene.2017.00001
Terriac E, Coceano G, Mavajian Z, …, Lautenschläger F, Gad A, “Vimentin Levels and Serine 71 Phosphorylation in the Control of Cell-Matrix Adhesions, Migration Speed, and Shape of Transformed Human Fibroblasts”, Cells, 2017, 6 (1), 2, https://doi.org/10.3390/cells6010002
Skogs M, Stadler C, Schutten R, …, Uhlén M, Lundberg E, “Antibody Validation in Bioimaging Applications Based on Endogenous Expression of Tagged Proteins.”, J. Proteome Res., 2017, 16 (1), 147-155, https://doi.org/10.1021/acs.jproteome.6b00821
Ishaq O, Sadanandan SK, Wählby C, “Deep Fish: Deep Learning–Based Classification of Zebrafish Deformation for High-Throughput Screening”, SLAS DISCOVERY: Advancing Life Sciences R&D, 2017, 22 (1), 102-107, https://doi.org/10.1177/1087057116667894
Schizas N, Perry S, Andersson B, …, Kullander K, Hailer NP, “Differential Neuroprotective Effects of Interleukin-1 Receptor Antagonist on Spinal Cord Neurons after Excitotoxic Injury”, Neuroimmunomodulation, 2017, 24 (4-5), 220-230, https://doi.org/10.1159/000484607
Bombrun M, Ranefall P, Lindblad J, …, Nilsson M, Wählby C, “Decoding Gene Expression in 2D and 3D”, Scandinavian Conference on Image Analysis 2017, 2017, 257-268, https://doi.org/10.1007/978-3-319-59129-2_22
2016
Villamil Giraldo AM, Fyrner T, Wennmalm S, …, Öllinger K, Ederth T, “Spontaneous Vesiculation and pH-Induced Disassembly of a Lysosomotropic Detergent: Impacts on Lysosomotropism and Lysosomal Delivery.”, Langmuir, 2016, 32 (50), 13566-13575, https://doi.org/10.1021/acs.langmuir.6b03458
Scharaw S, Iskar M, Ori A, …, Bork P, Pepperkok R, “The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR.”, J. Cell Biol., 2016, 215 (4), 543-558, https://doi.org/10.1083/jcb.201601090
Gibbs A, Buggert M, Ranefall P, …, Broliden K, Tjernlund A, “Analysis of the Distribution of CD103 on CD8 T Cells in Blood and Genital Mucosa of HIVinfected Female Sex Workers”, Conference on HIV Research for Prevention (HIV R4P), 2016, October 17–20, Chicago, 2016
Blom H, Bernhem K, Brismar H, “Sodium pump organization in dendritic spines.”, Neurophotonics, 2016, 3 (4), 041803, https://doi.org/10.1117/1.NPh.3.4.041803
Nagaraj V, Kazim AS, Helgeson J, …, Zhang E, Renström E, “Elevated Basal Insulin Secretion in Type 2 Diabetes Caused by Reduced Plasma Membrane Cholesterol.”, Mol. Endocrinol., 2016, 30 (10), 1059-1069, https://doi.org/10.1210/me.2016-1023
“Abstracts of the HIV Research for Prevention Meeting, HIVR4P, 17-20 October, 2016, Chicago, USA”, AIDS Research and Human Retroviruses, 2016, 32 (S1), 1-409, https://doi.org/10.1089/aid.2016.5000.abstracts
Uhlen M, Bandrowski A, Carr S, …, Snyder M, Yamamoto T, “A proposal for validation of antibodies.”, Nat. Methods, 2016, 13 (10), 823-827, https://doi.org/10.1038/nmeth.3995
Nejedla M, Sadi S, Sulimenko V, …, Aspenström P, Karlsson R, “Profilin connects actin assembly with microtubule dynamics.”, Mol. Biol. Cell, 2016, 27 (15), 2381-2393, https://doi.org/10.1091/mbc.E15-11-0799
Kaucka M, Ivashkin E, Gyllborg D, …, Hellander A, Adameyko I, “Analysis of neural crest-derived clones reveals novel aspects of facial development.”, Sci Adv, 2016, 2 (8), e1600060, https://doi.org/10.1126/sciadv.1600060
Liu W, Edin F, Blom H, …, Laurell G, Rask-Andersen H, “Super-resolution structured illumination fluorescence microscopy of the lateral wall of the cochlea: the Connexin26/30 proteins are separately expressed in man.”, Cell Tissue Res., 2016, 365 (1), 13-27, https://doi.org/10.1007/s00441-016-2359-0
Burlaka I, Nilsson LM, Scott L, …, Brismar H, Aperia A, “Prevention of apoptosis averts glomerular tubular disconnection and podocyte loss in proteinuric kidney disease.”, Kidney Int., 2016, 90 (1), 135-148, https://doi.org/10.1016/j.kint.2016.03.026
Agostinho A, Manneberg O, van Schendel R, …, Brismar H, Höög C, “High density of REC8 constrains sister chromatid axes and prevents illegitimate synaptonemal complex formation.”, EMBO Rep., 2016, 17 (6), 901-913, https://doi.org/10.15252/embr.201642030
Vanherberghen B, Frisk T, Forslund E, …, Guldevall K, Önfelt B, “Microwell-Based Live Cell Imaging of NK Cell Dynamics to Assess Heterogeneity in Motility and Cytotoxic Response.”, Methods Mol. Biol., 2016, 1441, 87-106, https://doi.org/10.1007/978-1-4939-3684-7_8
Guldevall K, Brandt L, Forslund E, …, Uhlin M, Önfelt B, “Microchip Screening Platform for Single Cell Assessment of NK Cell Cytotoxicity.”, Front Immunol, 2016, 7, 119, https://doi.org/10.3389/fimmu.2016.00119
Rabasovic MD, Sisamakis E, Wennmalm S, Widengren J, “Label-Free Fluctuation Spectroscopy Based on Coherent Anti-Stokes Raman Scattering from Bulk Water Molecules.”, Chemphyschem, 2016, 17 (7), 1025-1033, https://doi.org/10.1002/cphc.201501129
Aperia A, Akkuratov EE, Fontana JM, Brismar H, “Na+-K+-ATPase, a new class of plasma membrane receptors.”, Am. J. Physiol., Cell Physiol., 2016, 310 (7), C491-C495, https://doi.org/10.1152/ajpcell.00359.2015
Ranefall P, Wählby C, “Global gray-level thresholding based on object size.”, Cytometry A, 2016, 89 (4), 385-390, https://doi.org/10.1002/cyto.a.22806
Schedin-Weiss S, Caesar I, Winblad B, Blom H, Tjernberg LO, “Super-resolution microscopy reveals γ-secretase at both sides of the neuronal synapse.”, Acta Neuropathol Commun, 2016, 4, 29, https://doi.org/10.1186/s40478-016-0296-5
Holm A, Magnusson KE, Vikström E, “Pseudomonas aeruginosa N-3-oxo-dodecanoyl-homoserine Lactone Elicits Changes in Cell Volume, Morphology, and AQP9 Characteristics in Macrophages”, Front. Cell. Infect. Microbiol., 2016, 6, https://doi.org/10.3389/fcimb.2016.00032
Matuszewski DJ, Wählby C, Puigvert JC, Sintorn IM, “PopulationProfiler: A Tool for Population Analysis and Visualization of Image-Based Cell Screening Data.”, PLoS ONE, 2016, 11 (3), e0151554, https://doi.org/10.1371/journal.pone.0151554
Navarro JR, Wennmalm S, Godfrey J, Breitholtz M, Edlund U, “Luminescent Nanocellulose Platform: From Controlled Graft Block Copolymerization to Biomarker Sensing.”, Biomacromolecules, 2016, 17 (3), 1101-1109, https://doi.org/10.1021/acs.biomac.5b01716
Turdalieva A, Solandt J, Shambetova N, …, Zelenina M, Fu Y, “Bioelectric and Morphological Response of Liquid-Covered Human Airway Epithelial Calu-3 Cell Monolayer to Periodic Deposition of Colloidal 3-Mercaptopropionic-Acid Coated CdSe-CdS/ZnS Core-Multishell Quantum Dots.”, PLoS ONE, 2016, 11 (2), e0149915, https://doi.org/10.1371/journal.pone.0149915
Liu F, Koval M, Ranganathan S, …, Kelleher NL, Baker MS, “Systems Proteomics View of the Endogenous Human Claudin Protein Family.”, J. Proteome Res., 2016, 15 (2), 339-359, https://doi.org/10.1021/acs.jproteome.5b00769
Sadanandan SK, Baltekin O, Magnusson KEG, …, Elf J, Wahlby C, “Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria”, IEEE J. Sel. Top. Signal Process., 2016, 10 (1), 174-184, https://doi.org/10.1109/jstsp.2015.2491304
Unnersjö-Jess D, Scott L, Blom H, Brismar H, “Super-resolution stimulated emission depletion imaging of slit diaphragm proteins in optically cleared kidney tissue.”, Kidney Int., 2016, 89 (1), 243-247, https://doi.org/10.1038/ki.2015.308
Sadanandan SK, Ranefall P, Wählby C, “Feature Augmented Deep Neural Networks for Segmentation of Cells”,, 2016, 231-243, https://doi.org/10.1007/978-3-319-46604-0_17
Mignardi M, Ishaq O, Qian X, Wahlby C, “Bridging Histology and Bioinformatics—Computational Analysis of Spatially Resolved Transcriptomics”, Proc. IEEE, 2016, 1-12, https://doi.org/10.1109/jproc.2016.2538562